MGI GO graphs
This set of graphs presents a GO annotations made to individual mouse genes by GO curators at MGI.
This complements the presentation of GO annotations in text and tabular form.

MGI Protein Super Family (paralog) GO graphs
This set of graphs presents experimental GO annotations made to mouse gene paralog sets by GO curators at MGI.
This collects GO annotations made to all members of the protein super family for the purposes of comparison of individual member annotations.

• Compare only molecular function experimental annotations.
• Compare all experimental annotations.

1. Compare mouse-human-rat GO annotations made to MGI curated orthology sets.
GO annotations are provided by:

In order to emphasize a comparison of literature curation, we remove IC, IEA, IGC, NAS, ND, NR, RCA, TAS and ISS evidence codes from the annotation files.

2. Compare experimental mouse-human-rat-chicken-fly-worm-tair-rice-yeast-pombe-pfalc GO annotations for HomoloGene orthology sets.

GO annotations are provided by:

• Human from GOA;
• Mouse from MGI;
• Rat from RGD;
• Chicken from GOA;
• Fly from Flybase;
• Worm from Wormbase;
• Tair from TAIR;
• Rice from Gramene;
• Yeast from SGD;
• Pombe from S.pombe Genome Project;
• Pfalc from PlasmoDB.

In order to emphasize a comparison of literature curation, we remove IC, IEA, IGC, NAS, ND, NR, RCA, TAS and ISS evidence codes from the annotation files.

3. Compare 13 organism GO annotations made to human disease genes and disorders in OrthoDisease orthology set .

GO annotations are provided by:

• Mouse from MGI
• Human from GO Annotations @ EBI (GOA)
• Rat from RGD
• Chicken from GOA
• Fly from FlyBase
• Pfalc from PlasmoDB
• Worm from WormBase
• Dicty from dictyBase
• Yeast from SGD
• Zfin from ZFIN
• Tair from TAIR/TIGR
• Rice from Gramene
• Pombe from SangerGeneDB.

In order to emphasize a comparison of literature curation, we remove IEA, ISS, ND, NAS, NR, and RCA evidence codes from the annotation files.

MGI MP graphs
This set of graphs presents MP annotations made to alleles of mouse genes by curators at MGI.
This complements the presentation of annotations in tabular form.

MGI MA graphs
This set of graphs presents a sample of annotations made to expression data for mouse genes by curators at MGI.

MGI EMAP graphs for developmental stage-specific expression data
This set of graphs presents a sample of annotations made to expression data for mouse genes by curators at MGI.

This complements the presentation of annotations in tabular form.

GO graphs
This set of graphs presents a graphical view of the GO Directed Acyclic Graph (DAG).

OBO graphs
This set of graphs presents a graphical view of the Adult mouse anatomical dictionary OBO DAG
This set of graphs presents a graphical view of the Mammalian phenotype OBO DAG
This set of graphs presents a graphical view of the Cell type OBO DAG
This set of graphs presents a graphical view of the Sequence Ontology OBO DAG