MGI Shh GXD MA annotations for TS15

Green arrows indicate "is_a"; Purple arrows indicate "part_of"
Graph is also available as SVG (requires plug-in) Previous stage: TS14 Next stage: TS16
IDTerm AssayResult DetailsAllelesAge
EMAP:1001TS15,embryo Northern blotMGI:2137953E9.5
EMAP:1001TS15,embryo Northern blotMGI:2449700E9.5
EMAP:1001TS15,embryo RNA in situMGI:1328788E9.5
EMAP:1001TS15,embryo RNA in situMGI:1328788Alx4tm1Rwi/Alx4tm1RwiE9.5
EMAP:1001TS15,embryo RNA in situMGI:1328788Alx4tm1Rwi/Alx4tm1Rwi,Cart1tm1Crm/Cart1tm1CrmE9.5
EMAP:1001TS15,embryo RNA in situMGI:1328788Cart1tm1Crm/Cart1tm1CrmE9.5
EMAP:1001TS15,embryo RNA in situMGI:1338373Wnt3atm1Amc/Wnt3atm1AmcE9.5
EMAP:1008TS15,endoderm,branchial membrane,1st arch RNA in situMGI:2449770E9.5
EMAP:1008TS15,endoderm,branchial membrane,1st arch RNA in situMGI:2449793E9.5
EMAP:1011TS15,mandibular component,1st arch RNA in situMGI:2150000E9.5
EMAP:1011TS15,mandibular component,1st arch RNA in situMGI:2150000Prrx1tm1Tex/Prrx1tm1Tex,Prrx2tm1Fme/Prrx2tm1FmeE9.5
EMAP:1025TS15,2nd arch RNA in situMGI:2150089E9.5
EMAP:1025TS15,2nd arch RNA in situMGI:2150089Hoxa1tm1Ipc/Hoxa1tm1IpcE9.5
EMAP:1025TS15,2nd arch RNA in situMGI:2150089Hoxa1tm1Ipc/Hoxa1tm1Ipc,Hoxb1tm1Ipc/Hoxb1tm1IpcE9.5
EMAP:1070TS15,forelimb bud RNA in situMGI:1328788Alx4tm1Rwi/Alx4tm1RwiE9.5
EMAP:1070TS15,forelimb bud RNA in situMGI:1328788Alx4tm1Rwi/Alx4tm1Rwi,Cart1tm1Crm/Cart1tm1CrmE9.5
EMAP:1073TS15,hindlimb ridge RNA in situMGI:1328788Alx4tm1Rwi/Alx4tm1RwiE9.5
EMAP:1073TS15,hindlimb ridge RNA in situMGI:1328788Alx4tm1Rwi/Alx4tm1Rwi,Cart1tm1Crm/Cart1tm1CrmE9.5
EMAP:1195TS15,notochord ImmunohistochemistryMGI:1342456E9.5
EMAP:1195TS15,notochord ImmunohistochemistryMGI:1342456Gli2tm1Alj/Gli2tm1AljE9.5
EMAP:1195TS15,notochord RNA in situMGI:1277848E9.5
EMAP:1195TS15,notochord RNA in situMGI:1277848Gli2tm1Alj/Gli2tm1AljE9.5
EMAP:1195TS15,notochord RNA in situMGI:1289471E9.5
EMAP:1195TS15,notochord RNA in situMGI:1327566E9.5
EMAP:1195TS15,notochord RNA in situMGI:1331350E9.5
EMAP:1195TS15,notochord RNA in situMGI:1331350Furintm1Ajmr/Furintm1AjmrE9.5
EMAP:1195TS15,notochord RNA in situMGI:1332404E9.5
EMAP:1195TS15,notochord RNA in situMGI:1333084E9.5
EMAP:1195TS15,notochord RNA in situMGI:1333084Bmp5se/Bmp5se,Bmp7tm1Rob/Bmp7tm1RobE9.5
EMAP:1195TS15,notochord RNA in situMGI:1337962Otx2tm1Pas/Otx2tm1PasE9.5
EMAP:1195TS15,notochord RNA in situMGI:1338649E9.5
EMAP:1195TS15,notochord RNA in situMGI:1338649Foxa2tm1Jrt/Foxa2+,Gsctm1Bhr/Gsctm1BhrE9.5
EMAP:1195TS15,notochord RNA in situMGI:1933567E9.5
EMAP:1195TS15,notochord RNA in situMGI:1933567Pcgf2tm1Hko/Pcgf2tm1Hko,Pcgf4tm1Brn/Pcgf4tm1BrnE9.5
EMAP:1195TS15,notochord RNA in situMGI:2137954E9.5
EMAP:1195TS15,notochord RNA in situMGI:2178345E10.0
EMAP:1195TS15,notochord RNA in situMGI:2178345E9.5
EMAP:1195TS15,notochord RNA in situMGI:2180039Sox17tm1Ysk/Sox17+E9.5
EMAP:1195TS15,notochord RNA in situMGI:2180039Sox17tm1Ysk/Sox17tm1YskE9.5
EMAP:1195TS15,notochord RNA in situMGI:2449770E9.5
EMAP:1195TS15,notochord RNA in situMGI:2449793E9.5
EMAP:1195TS15,notochord RNA in situMGI:2676443E9.5
EMAP:1195TS15,notochord RNA in situMGI:3529940E9.5
EMAP:1195TS15,notochord RNA in situMGI:3529940LtapLp/Ltap+E9.5
EMAP:1195TS15,notochord RNA in situMGI:3529940LtapLp/LtapLpE9.5
EMAP:1195TS15,notochord RNA in situMGI:3612139Dll3pu/Dll3+E9.5
EMAP:1195TS15,notochord RNA in situMGI:3612139Dll3pu/Dll3puE9.5
EMAP:1199TS15,future brain RNA in situMGI:1333084E9.5
EMAP:1199TS15,future brain RNA in situMGI:1333084Bmp5se/Bmp5se,Bmp7tm1Rob/Bmp7tm1RobE9.5
EMAP:1199TS15,future brain RNA in situMGI:1346421E9.5
EMAP:1199TS15,future brain RNA in situMGI:1346421oto/otoE9.5
EMAP:1199TS15,future brain RNA in situMGI:1934638E9.5-9.75
EMAP:1199TS15,future brain RNA in situMGI:2676617E9.5
EMAP:1200TS15,future forebrain Northern blotMGI:2449700E9.5
EMAP:1200TS15,future forebrain RNA in situMGI:1277848Gli2tm1Alj/Gli2tm1AljE9.5
EMAP:1200TS15,future forebrain RNA in situMGI:1342117E9.5
EMAP:1200TS15,future forebrain RNA in situMGI:1342117Gli2tm1Alj/Gli2tm1AljE9.5
EMAP:1200TS15,future forebrain RNA in situMGI:1345546E9.5
EMAP:1200TS15,future forebrain RNA in situMGI:1345546Pax2tm1Pgr/Pax2tm1PgrE9.5
EMAP:1200TS15,future forebrain RNA in situMGI:2137954E9.5
EMAP:1200TS15,future forebrain RNA in situMGI:2676443E9.5
EMAP:1201TS15,diencephalon RNA in situMGI:1338649E9.5
EMAP:1201TS15,diencephalon RNA in situMGI:1338649Foxa2tm1Jrt/Foxa2+,Gsctm1Bhr/Gsctm1BhrE9.5
EMAP:1201TS15,diencephalon RNA in situMGI:2137954E9.5
EMAP:1201TS15,diencephalon RNA in situMGI:2449770E9.5
EMAP:1201TS15,diencephalon RNA in situMGI:2449793E9.5
EMAP:1205TS15,floor plate,diencephalon RNA in situMGI:1327566E9.5
EMAP:1205TS15,floor plate,diencephalon RNA in situMGI:2676443E9.5
EMAP:1205TS15,floor plate,diencephalon RNA in situMGI:3529940E9.5
EMAP:1205TS15,floor plate,diencephalon RNA in situMGI:3529940LtapLp/Ltap+E9.5
EMAP:1205TS15,floor plate,diencephalon RNA in situMGI:3529940LtapLp/LtapLpE9.5
EMAP:1212TS15,telencephalon ImmunohistochemistryMGI:2676237E9.5
EMAP:1212TS15,telencephalon ImmunohistochemistryMGI:2676237Pax6Sey/Pax6+E9.5
EMAP:1212TS15,telencephalon ImmunohistochemistryMGI:2676237Pax6Sey/Pax6SeyE9.5
EMAP:1212TS15,telencephalon ImmunohistochemistryMGI:2676237Titf1tm1Shk/Titf1tm1ShkE9.5
EMAP:1212TS15,telencephalon RNA in situMGI:1930433E9.5
EMAP:1212TS15,telencephalon RNA in situMGI:2137954E9.5
EMAP:1212TS15,telencephalon RT-PCRMGI:2157798E9.5
EMAP:1215TS15,floor plate,telencephalon RNA in situMGI:1327566E9.5
EMAP:1215TS15,floor plate,telencephalon RNA in situMGI:1934638E9.5-9.75
EMAP:1215TS15,floor plate,telencephalon RNA in situMGI:2676443E9.5
EMAP:1218TS15,future midbrain Northern blotMGI:2449700E9.5
EMAP:1218TS15,future midbrain RNA in situMGI:1342117E9.5
EMAP:1218TS15,future midbrain RNA in situMGI:2137954E9.5
EMAP:1219TS15,floor plate,future midbrain RNA in situMGI:1327566E9.5
EMAP:1219TS15,floor plate,future midbrain RNA in situMGI:1934638E9.5-9.75
EMAP:1219TS15,floor plate,future midbrain RNA in situMGI:2449770E9.5
EMAP:1219TS15,floor plate,future midbrain RNA in situMGI:2676443E9.5
EMAP:1219TS15,floor plate,future midbrain RNA in situMGI:3529940E9.5
EMAP:1219TS15,floor plate,future midbrain RNA in situMGI:3529940LtapLp/Ltap+E9.5
EMAP:1219TS15,floor plate,future midbrain RNA in situMGI:3529940LtapLp/LtapLpE9.5
EMAP:1223TS15,future rhombencephalon RNA in situMGI:1342117E9.5
EMAP:1223TS15,future rhombencephalon RNA in situMGI:1934638E9.5-9.75
EMAP:1223TS15,future rhombencephalon RNA in situMGI:2449770E9.5
EMAP:1223TS15,future rhombencephalon RNA in situMGI:2449793E9.5
EMAP:1223TS15,future rhombencephalon RNA in situMGI:3033455E9.5
EMAP:1226TS15,floor plate,rhombomere 01 RNA in situMGI:1327566E9.5
EMAP:1226TS15,floor plate,rhombomere 01 RNA in situMGI:2676443E9.5
EMAP:1230TS15,floor plate,rhombomere 02 RNA in situMGI:1327566E9.5
EMAP:1230TS15,floor plate,rhombomere 02 RNA in situMGI:2676443E9.5
EMAP:1234TS15,floor plate,rhombomere 03 RNA in situMGI:1327566E9.5
EMAP:1234TS15,floor plate,rhombomere 03 RNA in situMGI:2676443E9.5
EMAP:1238TS15,floor plate,rhombomere 04 RNA in situMGI:1327566E9.5
EMAP:1238TS15,floor plate,rhombomere 04 RNA in situMGI:2676443E9.5
EMAP:1242TS15,floor plate,rhombomere 05 RNA in situMGI:1327566E9.5
EMAP:1242TS15,floor plate,rhombomere 05 RNA in situMGI:2676443E9.5
EMAP:1246TS15,floor plate,rhombomere 06 RNA in situMGI:1327566E9.5
EMAP:1246TS15,floor plate,rhombomere 06 RNA in situMGI:2676443E9.5
EMAP:1250TS15,floor plate,rhombomere 07 RNA in situMGI:1327566E9.5
EMAP:1250TS15,floor plate,rhombomere 07 RNA in situMGI:2676443E9.5
EMAP:1254TS15,floor plate,rhombomere 08 RNA in situMGI:1327566E9.5
EMAP:1254TS15,floor plate,rhombomere 08 RNA in situMGI:2676443E9.5
EMAP:1257TS15,future spinal cord ImmunohistochemistryMGI:1342456E9.5
EMAP:1257TS15,future spinal cord RNA in situMGI:1342117E9.5
EMAP:1259TS15,neural tube,future spinal cord ImmunohistochemistryMGI:2676441Ptch1tm1Mps/Ptch1tm1MpsE9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:1331350E9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:1331350Furintm1Ajmr/Furintm1AjmrE9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:1332609E9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:1340423E9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:1340423Gli3Xt-J/Gli3Xt-JE9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:2137954E9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:3529951E9.5
EMAP:1259TS15,neural tube,future spinal cord RNA in situMGI:3529951LtapLp/LtapLpE9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1289471E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1327566E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1331350E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1331350Furintm1Ajmr/Furintm1AjmrE9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1332404E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1332609E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1337962Otx2tm1Pas/Otx2tm1PasE9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1338649E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:1338649Foxa2tm1Jrt/Foxa2+,Gsctm1Bhr/Gsctm1BhrE9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:2137954E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:2449770E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:2676443E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:3529940E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:3529940LtapLp/Ltap+E9.5
EMAP:1260TS15,floor plate,neural tube,future spinal cord RNA in situMGI:3529940LtapLp/LtapLpE9.5
EMAP:1297TS15,process,nose RNA in situMGI:2152082E9.5
EMAP:1297TS15,process,nose RNA in situMGI:2152082Alx3tm1Fme/Alx3tm1Fme,Alx4lst-J/Alx4lst-JE9.5
EMAP:1363TS15,gut RNA in situMGI:1289471E9.5
EMAP:1363TS15,gut RNA in situMGI:1331350E9.5
EMAP:1363TS15,gut RNA in situMGI:1331350Furintm1Ajmr/Furintm1AjmrE9.5
EMAP:1363TS15,gut RNA in situMGI:2152857E9.5
EMAP:1363TS15,gut RNA in situMGI:2180039Sox17tm1Ysk/Sox17+E9.5
EMAP:1363TS15,gut RNA in situMGI:2676443E9.5
EMAP:1364TS15,foregut RNA in situMGI:1331350E9.5
EMAP:1364TS15,foregut RNA in situMGI:1331350Furintm1Ajmr/Furintm1AjmrE9.5
EMAP:1364TS15,foregut RNA in situMGI:1333084E9.5
EMAP:1364TS15,foregut RNA in situMGI:1333084Bmp5se/Bmp5se,Bmp7tm1Rob/Bmp7tm1RobE9.5
EMAP:1364TS15,foregut RNA in situMGI:1338649E9.5
EMAP:1364TS15,foregut RNA in situMGI:1338649Foxa2tm1Jrt/Foxa2+,Gsctm1Bhr/Gsctm1BhrE9.5
EMAP:1364TS15,foregut RNA in situMGI:2180039Sox17tm1Ysk/Sox17+E9.5
EMAP:1364TS15,foregut RNA in situMGI:2180039Sox17tm1Ysk/Sox17tm1YskE9.5
EMAP:1364TS15,foregut RNA in situMGI:3529582E9.5
EMAP:1364TS15,foregut RNA in situMGI:3529940E9.5
EMAP:1364TS15,foregut RNA in situMGI:3529940LtapLp/Ltap+E9.5
EMAP:1364TS15,foregut RNA in situMGI:3529940LtapLp/LtapLpE9.5
EMAP:1401TS15,hindgut RNA in situMGI:1331350Furintm1Ajmr/Furintm1AjmrE9.5
EMAP:1401TS15,hindgut RNA in situMGI:1333084E9.5
EMAP:1401TS15,hindgut RNA in situMGI:1333084Bmp5se/Bmp5se,Bmp7tm1Rob/Bmp7tm1RobE9.5
EMAP:1401TS15,hindgut RNA in situMGI:2449770E9.5
EMAP:1401TS15,hindgut RNA in situMGI:2449793E9.5
EMAP:1401TS15,hindgut RNA in situMGI:3529940E9.5
EMAP:1401TS15,hindgut RNA in situMGI:3529940LtapLp/Ltap+E9.5
EMAP:1401TS15,hindgut RNA in situMGI:3529940LtapLp/LtapLpE9.5
EMAP:1407TS15,midgut RNA in situMGI:1331350Furintm1Ajmr/Furintm1AjmrE9.5
EMAP:1407TS15,midgut RNA in situMGI:2180039Sox17tm1Ysk/Sox17+E9.5
EMAP:1419TS15,lung RNA in situMGI:2137268E9.0
EMAP:1419TS15,lung RNA in situMGI:2137268Pitx2tm1Jfm/Pitx2tm1JfmE9.0
EMAP:1419TS15,lung RNA in situMGI:2137954E9.5
EMAP:1450TS15,future spinal cord,central nervous system,nervous system,tail RNA in situMGI:1333084E9.5
EMAP:1450TS15,future spinal cord,central nervous system,nervous system,tail RNA in situMGI:1333084Bmp5se/Bmp5se,Bmp7tm1Rob/Bmp7tm1RobE9.5
EMAP:1451TS15,neural plate,future spinal cord,central nervous system,nervous system,tail RNA in situMGI:1332609E9.5