MGI MouseCyc GO annotations for PWY-5123

MGI MouseCyc GO annotations for PWY-5123: trans,trans-farnesyl diphosphate biosynthesis

Roles of genes might be detected in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.
Graph is also available as SVG (requires plug-in)

Gray arrows indicate "is_a";
Blue arrows indicate "part_of";
Black arrows indicate "regulates";
Green arrows indicate "positively_regulates";
Red arrows indicate "negatively_regulates"

Compare annotations to GO categories for PWY-5123.

Entry indicates that gene is in this pathway.
Colored entries indicate GO annotation.

Category	ID	Term	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Molecular Function	GO:0005488	binding	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Molecular Function	GO:0003824	catalytic activity	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Cellular Component	GO:0005623	cell	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Cellular Component	GO:0044464	cell part	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Cellular Component	GO:0043226	organelle	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Biological Process	GO:0065007	biological regulation	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Biological Process	GO:0009987	cellular process	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Biological Process	GO:0008152	metabolic process	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Biological Process	GO:0048519	negative regulation of biological process	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Biological Process	GO:0048518	positive regulation of biological process	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Biological Process	GO:0050789	regulation of biological process	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12
Biological Process	GO:0050896	response to stimulus	Fdps	Fntb	Ggps1	Idi1	Idi2	Nudt12

Full set of annotations for PWY-5123

Category	ID	Term	Mouse gene	Evidence	Color Key
Molecular Function	GO:0003824	catalytic activity	Ggps1	IEA	color key
Molecular Function	GO:0003824	catalytic activity	Fntb	IEA	color key
Molecular Function	GO:0004161	dimethylallyltranstransferase activity	Fdps	IEA	color key
Molecular Function	GO:0004161	dimethylallyltranstransferase activity	Ggps1	IEA	color key
Molecular Function	GO:0004311	farnesyltranstransferase activity	Ggps1	IEA	color key
Molecular Function	GO:0004311	farnesyltranstransferase activity	Fntb	IMP	color key
Molecular Function	GO:0004337	geranyltranstransferase activity	Fdps	IEA	color key
Molecular Function	GO:0004337	geranyltranstransferase activity	Ggps1	IDA	color key
Molecular Function	GO:0016787	hydrolase activity	Nudt12	IEA	color key
Molecular Function	GO:0016787	hydrolase activity	Idi1	IEA	color key
Molecular Function	GO:0016853	isomerase activity	Idi1	IEA	color key
Molecular Function	GO:0016853	isomerase activity	Idi2	IEA	color key
Molecular Function	GO:0004452	isopentenyl-diphosphate delta-isomerase activity	Idi1	IEA	color key
Molecular Function	GO:0000287	magnesium ion binding	Nudt12	IEA	color key
Molecular Function	GO:0000287	magnesium ion binding	Idi1	IEA	color key
Molecular Function	GO:0030145	manganese ion binding	Nudt12	IEA	color key
Molecular Function	GO:0046872	metal ion binding	Fntb	IEA	color key
Molecular Function	GO:0046872	metal ion binding	Nudt12	IEA	color key
Molecular Function	GO:0046872	metal ion binding	Idi1	IEA	color key
Molecular Function	GO:0000210	NAD+ diphosphatase activity	Nudt12	IEA	color key
Molecular Function	GO:0004659	prenyltransferase activity	Fntb	IEA	color key
Molecular Function	GO:0004660	protein farnesyltransferase activity	Fntb	IEA	color key
Molecular Function	GO:0016740	transferase activity	Fdps	IEA	color key
Molecular Function	GO:0016740	transferase activity	Ggps1	IEA	color key
Molecular Function	GO:0016740	transferase activity	Fntb	IEA	color key
Molecular Function	GO:0008270	zinc ion binding	Fntb	IEA	color key
Cellular Component	GO:0005575	cellular_component	Fntb	ND	color key
Cellular Component	GO:0005737	cytoplasm	Fdps	IEA	color key
Cellular Component	GO:0005737	cytoplasm	Ggps1	IEA	color key
Cellular Component	GO:0005777	peroxisome	Nudt12	IEA	color key
Cellular Component	GO:0005777	peroxisome	Idi1	IEA	color key
Biological Process	GO:0016117	carotenoid biosynthetic process	Idi1	IEA	color key
Biological Process	GO:0006695	cholesterol biosynthetic process	Fdps	IEA	color key
Biological Process	GO:0006695	cholesterol biosynthetic process	Idi1	IEA	color key
Biological Process	GO:0008299	isoprenoid biosynthetic process	Fdps	IEA	color key
Biological Process	GO:0008299	isoprenoid biosynthetic process	Ggps1	IEA	color key
Biological Process	GO:0008299	isoprenoid biosynthetic process	Idi1	IEA	color key
Biological Process	GO:0008610	lipid biosynthetic process	Fdps	IEA	color key
Biological Process	GO:0008610	lipid biosynthetic process	Idi1	IEA	color key
Biological Process	GO:0008285	negative regulation of cell proliferation	Fntb	IMP	color key
Biological Process	GO:0008284	positive regulation of cell proliferation	Fntb	IMP	color key
Biological Process	GO:0048146	positive regulation of fibroblast proliferation	Fntb	IMP	color key
Biological Process	GO:0006694	steroid biosynthetic process	Fdps	IEA	color key
Biological Process	GO:0006694	steroid biosynthetic process	Idi1	IEA	color key
Biological Process	GO:0016126	sterol biosynthetic process	Fdps	IEA	color key
Biological Process	GO:0016126	sterol biosynthetic process	Idi1	IEA	color key
Biological Process	GO:0042060	wound healing	Fntb	IMP	color key