Compare GO annotations for PEX1 and its Reference Genomes orthologs

Compare GO annotations for PEX1 and its orthologs

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Thu Jan 8 13:33:51 2009.

Compare annotations to GO categories for PEX1.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	Human	Mouse	(Rat)	X	Zfish	Fly	Worm	(Dicty)	X	Yeast	(Pombe)	X
Molecular Function	GO:0003824	catalytic activity	Human	Mouse	(Rat)	X	Zfish	(Fly)	Worm	Dicty	X	Yeast	(Pombe)	X
Cellular Component	GO:0005623	cell	Human	Mouse	Rat	X	Zfish	(Fly)	Worm	(Dicty)	X	Yeast	Pombe	X
Cellular Component	GO:0044464	cell part	Human	Mouse	Rat	X	Zfish	(Fly)	Worm	(Dicty)	X	Yeast	Pombe	X
Cellular Component	GO:0043226	organelle	Human	Mouse	Rat	X	Zfish	(Fly)	Worm	(Dicty)	X	Yeast	(Pombe)	X
Cellular Component	GO:0044422	organelle part	Human	Mouse	Rat	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X
Biological Process	GO:0065007	biological regulation	Human	Mouse	Rat	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X
Biological Process	GO:0009987	cellular process	Human	(Mouse)	(Rat)	X	Zfish	(Fly)	Worm	(Dicty)	X	Yeast	(Pombe)	X
Biological Process	GO:0051234	establishment of localization	Human	Mouse	(Rat)	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X
Biological Process	GO:0040007	growth	Human	Mouse	Rat	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X
Biological Process	GO:0051179	localization	Human	(Mouse)	(Rat)	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X
Biological Process	GO:0008152	metabolic process	Human	Mouse	Rat	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X
Biological Process	GO:0048518	positive regulation of biological process	Human	Mouse	Rat	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X
Biological Process	GO:0050789	regulation of biological process	Human	Mouse	Rat	X	Zfish	Fly	Worm	Dicty	X	Yeast	Pombe	X

Full set of experimental (and ISS) annotations for PEX1

Category	ID	Term	DB Object	Evidence	With_From	Organism	Reference
Molecular Function	GO:0005524	ATP binding	PEX1	IMP		Human	PMID:16854980
Molecular Function	GO:0005524	ATP binding	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Molecular Function	GO:0005524	ATP binding	pex1	ISS	InterPro:IPR003959	Dicty	dictyBase_REF:10155
Molecular Function	GO:0005524	ATP binding	pex1	ISS	Pfam:PF00004	Pombe	PMID:17072883
Molecular Function	GO:0016887	ATPase activity	PEX1	IMP		Yeast	SGD_REF:S000080317\|PMID:15634331
Molecular Function	GO:0016887	ATPase activity	PEX1	ISS	SGD:S000000284\|SGD:S000002284	Yeast	SGD_REF:S000045468\|PMID:1825027
Molecular Function	GO:0016887	ATPase activity	pex1	ISS	SGD:S000001680	Pombe	PMID:17072883
Molecular Function	GO:0042623	ATPase activity, coupled	PEX1	IMP		Human	PMID:16854980
Molecular Function	GO:0042623	ATPase activity, coupled	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Molecular Function	GO:0042623	ATPase activity, coupled	l(3)70Da	ISS	NCBI_gi:4505725	Fly	FB:FBrf0105495
Molecular Function	GO:0008022	protein C-terminus binding	PEX1	IPI	UniProtKB:Q13608	Human	PMID:16854980
Molecular Function	GO:0008022	protein C-terminus binding	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Molecular Function	GO:0032403	protein complex binding	PEX1	IDA		Human	PMID:16854980
Molecular Function	GO:0032403	protein complex binding	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Molecular Function	GO:0046982	protein heterodimerization activity	PEX1	IPI	SGD:S000005273	Yeast	SGD_REF:S000122542\|PMID:16007078
Molecular Function	GO:0046982	protein heterodimerization activity	PEX1	IMP		Yeast	SGD_REF:S000080317\|PMID:15634331
Molecular Function	GO:0046982	protein heterodimerization activity	PEX1	IPI	SGD:S000005273	Yeast	SGD_REF:S000080317\|PMID:15634331
Molecular Function	GO:0046982	protein heterodimerization activity	PEX1	IPI	SGD:S000005273	Yeast	SGD_REF:S000122551\|PMID:16911527
Cellular Component	GO:0005737	cytoplasm	PEX1	IDA		Human	PMID:9588209
Cellular Component	GO:0005737	cytoplasm	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Cellular Component	GO:0005737	cytoplasm	pex1	IDA		Pombe	PMID:16823372
Cellular Component	GO:0005829	cytosol	PEX1	IDA		Human	PMID:16854980
Cellular Component	GO:0005829	cytosol	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Cellular Component	GO:0005829	cytosol	pex1	IDA		Pombe	PMID:16823372
Cellular Component	GO:0005624	membrane fraction	PEX1	IDA		Yeast	SGD_REF:S000122551\|PMID:16911527
Cellular Component	GO:0005778	peroxisomal membrane	PEX1	IDA		Human	PMID:11439091
Cellular Component	GO:0005778	peroxisomal membrane	Pex1	IDA		Rat	RGD:1580664\|PMID:14561759
Cellular Component	GO:0005778	peroxisomal membrane	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Cellular Component	GO:0005777	peroxisome	PEX1	IDA		Human	PMID:16854980
Cellular Component	GO:0005777	peroxisome	Pex1	IDA		Mouse	MGI:MGI:3693380\|PMID:14561759
Cellular Component	GO:0005777	peroxisome	Pex1	ISS	RGD:1557211	Rat	RGD:1624291
Cellular Component	GO:0005777	peroxisome	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Cellular Component	GO:0005777	peroxisome	l(3)70Da	ISS	NCBI_gi:4505725	Fly	FB:FBrf0105495
Cellular Component	GO:0005777	peroxisome	pex1	ISS	UniProt:O43933	Dicty	dictyBase_REF:10155
Cellular Component	GO:0005777	peroxisome	PEX1	IDA		Yeast	SGD_REF:S000074185\|PMID:14562095
Cellular Component	GO:0005777	peroxisome	pex1	ISS	SGD:S000001680	Pombe	PMID:17072883
Cellular Component	GO:0005625	soluble fraction	PEX1	IDA		Yeast	SGD_REF:S000122551\|PMID:16911527
Biological Process	GO:0060152	microtubule-based peroxisome localization	PEX1	IMP		Human	PMID:16449325
Biological Process	GO:0060152	microtubule-based peroxisome localization	Pex1	ISO	UniProtKB:O43933	Mouse	MGI:MGI:2154458
Biological Process	GO:0060152	microtubule-based peroxisome localization	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Biological Process	GO:0007031	peroxisome organization	l(3)70Da	ISS	NCBI_gi:4505725	Fly	FB:FBrf0105495
Biological Process	GO:0007031	peroxisome organization	pex1	ISS	UniProt:O43933	Dicty	dictyBase_REF:10155
Biological Process	GO:0007031	peroxisome organization	pex1	ISS	SGD:S000001680	Pombe	PMID:17072883
Biological Process	GO:0040010	positive regulation of growth rate	prx-1	IMP	WB:WBRNAi00024539\|WB:WBPhenotype:0000031	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0040010	positive regulation of growth rate	prx-1	IMP	WB:WBRNAi00027170\|WB:WBPhenotype:0000031	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0016558	protein import into peroxisome matrix	PEX1	IMP		Human	PMID:9398847
Biological Process	GO:0016558	protein import into peroxisome matrix	Pex1	ISS	RGD:1346322	Rat	RGD:1624291
Biological Process	GO:0016562	protein import into peroxisome matrix, receptor recycling	PEX1	IMP		Yeast	SGD_REF:S000122542\|PMID:16007078
Biological Process	GO:0016562	protein import into peroxisome matrix, receptor recycling	PEX1	IDA		Yeast	SGD_REF:S000122542\|PMID:16007078
Biological Process	GO:0016562	protein import into peroxisome matrix, receptor recycling	PEX1	IGI	SGD:S000005273	Yeast	SGD_REF:S000122542\|PMID:16007078

Gene Ontology Evidence Code Abbreviations:

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)